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LOC116353075 gamma-enolase-like [ Oncorhynchus kisutch (coho salmon) ]

Gene ID: 116353075, updated on 14-Dec-2023

Summary

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Gene symbol
LOC116353075
Gene description
gamma-enolase-like
See related
Ensembl:ENSOKIG00005025306
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus kisutch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC116353075 in Genome Data Viewer
Location:
chromosome: LG2
Exon count:
11
Annotation release Status Assembly LG Location
101 current Okis_V2 (GCF_002021735.2) LG2 NC_034175.2 (6546803..6563425)

Linkage Group LG2 - NC_034175.2Genomic Context describing neighboring genes Neighboring gene cell division control protein 42 homolog Neighboring gene myeloid leukemia factor 2-like Neighboring gene atrophin-1-like Neighboring gene uncharacterized LOC109906433

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034175.2 Chromosome LG2 Reference Okis_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptome profiles for coho salmon (Oncorhynchus kisutch), a species undergoing rediploidization following whole-genome duplication. Kim JH, et al. Mar Genomics, 2016 Feb. PMID 26614614
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphopyruvate hydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of phosphopyruvate hydratase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gamma-enolase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus kisutch Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Okis_V2 Primary Assembly

Genomic

  1. NC_034175.2 Reference Okis_V2 Primary Assembly

    Range
    6546803..6563425
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031786230.1 → XP_031642090.1  gamma-enolase-like

    UniProtKB/TrEMBL
    A0A8C7HRR8
    Related
    ENSOKIP00005059156.1, ENSOKIT00005062896.1
    Conserved Domains (1) summary
    PLN00191
    Location:2 → 432
    PLN00191; enolase
Nucleotide Protein
Heading Accession and Version

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