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galnt11 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11) [ Oreochromis aureus ]

Gene ID: 116336532, updated on 18-Jun-2024

Summary

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Gene symbol
galnt11
Gene description
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11)
See related
Ensembl:ENSOABG00000011357
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis aureus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Orthologs
human zebrafish all
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Genomic context

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See galnt11 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
12
Annotation release Status Assembly LG Location
101 current ZZ_aureus (GCF_013358895.1) 9 NC_052950.1 (40139927..40151154)
100 previous assembly ASM587006v1 (GCF_005870065.1) Unplaced Scaffold NW_022257351.1 (298108..300557)

Linkage Group 9 - NC_052950.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120441853 Neighboring gene uncharacterized LOC116336534 Neighboring gene endothelial zinc finger protein induced by tumor necrosis factor alpha-like Neighboring gene chondrolectin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Notch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis aureus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZZ_aureus Primary Assembly

Genomic

  1. NC_052950.1 Reference ZZ_aureus Primary Assembly

    Range
    40139927..40151154
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039617596.1 → XP_039473530.1  polypeptide N-acetylgalactosaminyltransferase 11

    Related
    ENSOABP00000023669.2, ENSOABT00000024366.2
    Conserved Domains (2) summary
    cd02510
    Location:130 → 428
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:458 → 580
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

  2. XM_039617594.1 → XP_039473528.1  polypeptide N-acetylgalactosaminyltransferase 11

    Conserved Domains (2) summary
    cd02510
    Location:130 → 428
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:458 → 580
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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