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alg12 ALG12 alpha-1,6-mannosyltransferase [ Oreochromis aureus ]

Gene ID: 116334940, updated on 18-Jun-2024

Summary

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Gene symbol
alg12
Gene description
ALG12 alpha-1,6-mannosyltransferase
See related
Ensembl:ENSOABG00000017365
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis aureus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Orthologs
human zebrafish all
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Genomic context

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See alg12 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
9
Annotation release Status Assembly LG Location
101 current ZZ_aureus (GCF_013358895.1) 17 NC_052958.1 (6151655..6157087, complement)
100 previous assembly ASM587006v1 (GCF_005870065.1) Unplaced Scaffold NW_022256644.1 (2014075..2019917, complement)

Linkage Group 17 - NC_052958.1Genomic Context describing neighboring genes Neighboring gene bromodomain containing 1a Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene zinc finger, BED-type containing 4 Neighboring gene cysteine-rich with EGF-like domains 2 Neighboring gene Pim-3 proto-oncogene, serine/threonine kinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis aureus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZZ_aureus Primary Assembly

Genomic

  1. NC_052958.1 Reference ZZ_aureus Primary Assembly

    Range
    6151655..6157087 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031758496.2 → XP_031614356.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase

    UniProtKB/TrEMBL
    A0A668UE36
    Related
    ENSOABP00000038001.2, ENSOABT00000039042.2
    Conserved Domains (1) summary
    cl21590
    Location:19 → 337
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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