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LOC116323556 acetylcholine receptor subunit alpha-like [ Oreochromis aureus ]

Gene ID: 116323556, updated on 18-Jun-2024

Summary

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Gene symbol
LOC116323556
Gene description
acetylcholine receptor subunit alpha-like
See related
Ensembl:ENSOABG00000010803
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis aureus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
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Genomic context

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See LOC116323556 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
12
Annotation release Status Assembly LG Location
101 current ZZ_aureus (GCF_013358895.1) 13 NC_052954.1 (28570722..28590442, complement)
100 previous assembly ASM587006v1 (GCF_005870065.1) Unplaced Scaffold NW_022251794.1 (385725..403358, complement)

Linkage Group 13 - NC_052954.1Genomic Context describing neighboring genes Neighboring gene homeobox protein Hox-D9b-like Neighboring gene uncharacterized LOC120443275 Neighboring gene lunapark, ER junction formation factor Neighboring gene uncharacterized LOC120443256 Neighboring gene uncharacterized LOC120443257

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylcholine-gated monoatomic cation-selective channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetylcholine receptor subunit alpha-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis aureus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZZ_aureus Primary Assembly

Genomic

  1. NC_052954.1 Reference ZZ_aureus Primary Assembly

    Range
    28570722..28590442 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031743912.2 → XP_031599772.1  acetylcholine receptor subunit alpha-like

    UniProtKB/TrEMBL
    A0A668T5H8, A0A668T8D4
    Related
    ENSOABP00000022377.2, ENSOABT00000023035.2
    Conserved Domains (2) summary
    TIGR00860
    Location:115 → 541
    LIC; Cation transporter family protein
    cd19014
    Location:117 → 325
    LGIC_ECD_nAChR_A1; extracellular domain of nicotinic acetylcholine receptor subunit alpha 1 (CHRNA1)
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases