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hs3st2 heparan sulfate (glucosamine) 3-O-sulfotransferase 2 [ Oreochromis aureus ]

Gene ID: 116318408, updated on 18-Jun-2024

Summary

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Gene symbol
hs3st2
Gene description
heparan sulfate (glucosamine) 3-O-sulfotransferase 2
See related
Ensembl:ENSOABG00000004422
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis aureus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Orthologs
zebrafish all
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Genomic context

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See hs3st2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Annotation release Status Assembly LG Location
101 current ZZ_aureus (GCF_013358895.1) 4 NC_052945.1 (10948914..10978632)
100 previous assembly ASM587006v1 (GCF_005870065.1) Unplaced Scaffold NW_022249638.1 (398470..426778)

Linkage Group 4 - NC_052945.1Genomic Context describing neighboring genes Neighboring gene lysine (K)-specific demethylase 8 Neighboring gene heparan sulfate (glucosamine) 3-O-sulfotransferase 4 Neighboring gene ubiquitin specific peptidase 31 Neighboring gene BAI1 associated protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis aureus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZZ_aureus Primary Assembly

Genomic

  1. NC_052945.1 Reference ZZ_aureus Primary Assembly

    Range
    10948914..10978632
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031737404.2 → XP_031593264.1  heparan sulfate glucosamine 3-O-sulfotransferase 2

    UniProtKB/TrEMBL
    A0A668S0T0
    Related
    ENSOABP00000008070.2, ENSOABT00000008369.2
    Conserved Domains (1) summary
    pfam00685
    Location:123 → 360
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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