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st8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [ Oreochromis aureus ]

Gene ID: 116313527, updated on 18-Jun-2024

Summary

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Gene symbol
st8sia2
Gene description
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
See related
Ensembl:ENSOABG00000017625
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis aureus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Orthologs
human zebrafish all
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Genomic context

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See st8sia2 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
6
Annotation release Status Assembly LG Location
101 current ZZ_aureus (GCF_013358895.1) 7 NC_052948.1 (11776956..11791499, complement)
100 previous assembly ASM587006v1 (GCF_005870065.1) Unplaced Scaffold NW_022247490.1 (1231329..1245674, complement)

Linkage Group 7 - NC_052948.1Genomic Context describing neighboring genes Neighboring gene chromodomain helicase DNA binding protein 2 Neighboring gene family with sequence similarity 174 member B Neighboring gene solute carrier organic anion transporter family member 3A1a Neighboring gene si:dkeyp-59c12.1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-2,8-sialyltransferase 8B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis aureus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZZ_aureus Primary Assembly

Genomic

  1. NC_052948.1 Reference ZZ_aureus Primary Assembly

    Range
    11776956..11791499 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031731257.2 → XP_031587117.1  alpha-2,8-sialyltransferase 8B

    UniProtKB/TrEMBL
    A0A668UIH2
    Related
    ENSOABP00000060835.1, ENSOABT00000065238.1
    Conserved Domains (1) summary
    pfam00777
    Location:111 → 370
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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