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LOC116312359 mannose-binding protein C-like [ Oreochromis aureus ]

Gene ID: 116312359, updated on 7-Dec-2023

Summary

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Gene symbol
LOC116312359
Gene description
mannose-binding protein C-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis aureus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
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Genomic context

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See LOC116312359 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
5
Annotation release Status Assembly LG Location
101 current ZZ_aureus (GCF_013358895.1) 7 NC_052948.1 (20045514..20048131, complement)
100 previous assembly ASM587006v1 (GCF_005870065.1) Unplaced Scaffold NW_022245040.1 (1003329..1029864, complement)

Linkage Group 7 - NC_052948.1Genomic Context describing neighboring genes Neighboring gene interferon-induced transmembrane protein 5-like Neighboring gene mannose-binding protein C-like Neighboring gene mannose-binding protein C-like Neighboring gene mannose-binding protein C-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in rough endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannose-binding protein C-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis aureus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZZ_aureus Primary Assembly

Genomic

  1. NC_052948.1 Reference ZZ_aureus Primary Assembly

    Range
    20045514..20048131 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031729943.2 → XP_031585803.2  mannose-binding protein C-like

    UniProtKB/TrEMBL
    A0A668STS2
    Conserved Domains (1) summary
    cl02432
    Location:112 → 227
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases