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LOC116308765 prolyl 3-hydroxylase 2-like [ Actinia tenebrosa (Australian red waratah sea anemone) ]

Gene ID: 116308765, updated on 14-Dec-2023

Summary

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Gene symbol
LOC116308765
Gene description
prolyl 3-hydroxylase 2-like
See related
EnsemblRapid:LOC116308765
Gene type
protein coding
RefSeq status
MODEL
Organism
Actinia tenebrosa
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Actiniidae; Actinia
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Genomic context

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See LOC116308765 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM960242v1 (GCF_009602425.1) Unplaced Scaffold NW_022258202.1 (6368..20108, complement)

NW_022258202.1Genomic Context describing neighboring genes Neighboring gene bystin-like Neighboring gene putative uncharacterized protein DDB_G0281733 Neighboring gene ephrin-B2a-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022258202 Unplaced Scaffold Reference ASM960242v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prolyl 3-hydroxylase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Actinia tenebrosa Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM960242v1 Primary Assembly

Genomic

  1. NW_022258202.1 Reference ASM960242v1 Primary Assembly

    Range
    6368..20108 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031719248.1 → XP_031575108.1  prolyl 3-hydroxylase 2-like isoform X2

    UniProtKB/TrEMBL
    A0A6P8JBU2
    Related
    XP_031575108.1, XM_031719248.1
    Conserved Domains (1) summary
    smart00702
    Location:580 → 674
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  2. XM_031719247.1 → XP_031575107.1  prolyl 3-hydroxylase 2-like isoform X1

    UniProtKB/TrEMBL
    A0A6P8J5V7
    Related
    XP_031575107.1, XM_031719247.1
    Conserved Domains (1) summary
    smart00702
    Location:581 → 675
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  3. XM_031719249.1 → XP_031575109.1  prolyl 3-hydroxylase 2-like isoform X3

    UniProtKB/TrEMBL
    A0A6P8J5V9
    Related
    XP_031575109.1, XM_031719249.1
    Conserved Domains (1) summary
    smart00702
    Location:462 → 667
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
Nucleotide Protein
Heading Accession and Version

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