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LOC116262992 mediator of RNA polymerase II transcription subunit 23 [ Nymphaea colorata (pocket water lily) ]

Gene ID: 116262992, updated on 23-Nov-2023

Summary

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Gene symbol
LOC116262992
Gene description
mediator of RNA polymerase II transcription subunit 23
Gene type
protein coding
RefSeq status
MODEL
Organism
Nymphaea colorata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Nymphaeales; Nymphaeaceae; Nymphaea
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Genomic context

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See LOC116262992 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
21
Annotation release Status Assembly Chr Location
101 current ASM883128v2 (GCF_008831285.2) 10 NC_045147.1 (7181558..7316432)
100 previous assembly ASM883128v1 (GCF_008831285.1) 10 NC_045147.1 (7181556..7316426)

Chromosome 10 - NC_045147.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116263314 Neighboring gene bZIP transcription factor TRAB1-like Neighboring gene branchpoint-bridging protein-like Neighboring gene uncharacterized LOC126410421 Neighboring gene TPR repeat-containing thioredoxin TDX Neighboring gene bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase Neighboring gene nascent polypeptide-associated complex subunit alpha-like protein 1 Neighboring gene uncharacterized LOC126410445

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nymphaea colorata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM883128v2 Primary Assembly

Genomic

  1. NC_045147.1 Reference ASM883128v2 Primary Assembly

    Range
    7181558..7316432
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031642550.2 → XP_031498410.1  mediator of RNA polymerase II transcription subunit 23 isoform X1

    Conserved Domains (1) summary
    pfam11573
    Location:674 → 1172
    Med23; Mediator complex subunit 23

  2. XM_050079825.1 → XP_049935782.1  mediator of RNA polymerase II transcription subunit 23 isoform X2

RNA

  1. XR_004174549.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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