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Ahsg alpha-2-HS-glycoprotein [ Mus musculus (house mouse) ]

Gene ID: 11625, updated on 2-Nov-2024

Summary

Official Symbol
Ahsgprovided by MGI
Official Full Name
alpha-2-HS-glycoproteinprovided by MGI
Primary source
MGI:MGI:107189
See related
Ensembl:ENSMUSG00000022868 AllianceGenome:MGI:107189
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Predicted to enable endopeptidase inhibitor activity and receptor signaling protein tyrosine kinase inhibitor activity. Involved in negative regulation of bone mineralization. Acts upstream of or within ossification. Predicted to be located in Golgi apparatus; collagen-containing extracellular matrix; and extracellular space. Predicted to be part of protein-containing complex. Predicted to be active in extracellular matrix and extracellular region. Is expressed in several structures, including gut; heart; limb segment; reproductive system; and skeletal musculature. Human ortholog(s) of this gene implicated in alopecia-mental retardation syndrome 1; coronary artery disease; and type 2 diabetes mellitus. Orthologous to human AHSG (alpha 2-HS glycoprotein). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in liver E18 (RPKM 13022.2), liver adult (RPKM 6468.6) and 1 other tissue See more
Orthologs
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Genomic context

See Ahsg in Genome Data Viewer
Location:
16 B1; 16 13.74 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (22710793..22718193)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (22892015..22899451)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 30416 Neighboring gene TBCC domain containing 1 Neighboring gene STARR-positive B cell enhancer ABC_E484 Neighboring gene DnaJ heat shock protein family (Hsp40) member B11 Neighboring gene predicted gene, 30505 Neighboring gene predicted gene, 30611 Neighboring gene fetuin beta

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 
  • Targeted (3)  1 citation

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables cysteine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 
enables endopeptidase inhibitor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables receptor signaling protein tyrosine kinase inhibitor activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in acute-phase response IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in acute-phase response ISO
Inferred from Sequence Orthology
more info
 
involved_in acute-phase response ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in male gonad development ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of bone mineralization IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in negative regulation of bone mineralization IDA
Inferred from Direct Assay
more info
PubMed 
involved_in negative regulation of bone mineralization ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of cell growth ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of insulin receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within ossification IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of bone resorption ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of phagocytosis ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of phagocytosis ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in protein-containing complex assembly ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of inflammatory response IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of inflammatory response ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of inflammatory response ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 
located_in Golgi apparatus ISO
Inferred from Sequence Orthology
more info
 
located_in collagen-containing extracellular matrix ISO
Inferred from Sequence Orthology
more info
 
is_active_in extracellular matrix IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in extracellular region IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 
located_in extracellular space ISO
Inferred from Sequence Orthology
more info
 
part_of protein-containing complex ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
alpha-2-HS-glycoprotein
Names
countertrypin
fetuin-A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001276449.2NP_001263378.1  alpha-2-HS-glycoprotein isoform 2 precursor

    Status: VALIDATED

    Source sequence(s)
    CT027991
    Conserved Domains (1) summary
    smart00043
    Location:2696
    CY; Cystatin-like domain
  2. NM_001276450.2NP_001263379.1  alpha-2-HS-glycoprotein isoform 3 precursor

    Status: VALIDATED

    Source sequence(s)
    CT027991
    UniProtKB/TrEMBL
    Q3TIU3, Q3UEK5
    Conserved Domains (2) summary
    smart00043
    Location:26126
    CY; Cystatin-like domain
    pfam00031
    Location:142230
    Cystatin; Cystatin domain
  3. NM_013465.3NP_038493.1  alpha-2-HS-glycoprotein isoform 1 precursor

    See identical proteins and their annotated locations for NP_038493.1

    Status: VALIDATED

    Source sequence(s)
    CT027991
    Consensus CDS
    CCDS28071.1
    UniProtKB/Swiss-Prot
    O35634, P29699
    UniProtKB/TrEMBL
    Q3TIU3, Q3UEK5, Q3UEK9
    Related
    ENSMUSP00000023583.6, ENSMUST00000023583.7
    Conserved Domains (2) summary
    smart00043
    Location:26133
    CY; Cystatin-like domain
    pfam00031
    Location:149239
    Cystatin; Cystatin domain

RNA

  1. NR_075099.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    CT027991
    Related
    ENSMUST00000232098.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    22710793..22718193
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)