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ATP6V1A ATPase H+ transporting V1 subunit A [ Phasianus colchicus (ring-necked pheasant) ]

Gene ID: 116242412, updated on 27-Jul-2024

Summary

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Gene symbol
ATP6V1A
Gene description
ATPase H+ transporting V1 subunit A
See related
Ensembl:ENSPCLG00000020734
Gene type
protein coding
RefSeq status
MODEL
Organism
Phasianus colchicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Phasianus
Orthologs
human mouse all
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Genomic context

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See ATP6V1A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current ASM414374v1 (GCF_004143745.1) Unplaced Scaffold NW_022242647.1 (652230..680304, complement)

NW_022242647.1Genomic Context describing neighboring genes Neighboring gene WD repeat domain 3 Neighboring gene ganglioside induced differentiation associated protein 2 Neighboring gene terminal nucleotidyltransferase 5C Neighboring gene dual specificity phosphatase 12 Neighboring gene N-alpha-acetyltransferase 50, NatE catalytic subunit Neighboring gene uncharacterized LOC116242338 Neighboring gene upstream transcription factor family member 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022242647 Unplaced Scaffold Reference ASM414374v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ATP metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proton-transporting V-type ATPase, V1 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase catalytic subunit A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phasianus colchicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM414374v1 Primary Assembly

Genomic

  1. NW_022242647.1 Reference ASM414374v1 Primary Assembly

    Range
    652230..680304 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031613138.1 → XP_031468998.1  V-type proton ATPase catalytic subunit A

    UniProtKB/TrEMBL
    A0A669QRT8
    Conserved Domains (1) summary
    TIGR01042
    Location:19 → 609
    V-ATPase_V1_A; V-type (H+)-ATPase V1, A subunit

  2. XM_031613139.1 → XP_031468999.1  V-type proton ATPase catalytic subunit A

    UniProtKB/TrEMBL
    A0A669QRT8
    Related
    ENSPCLP00000023447.1, ENSPCLT00000032598.1
    Conserved Domains (1) summary
    TIGR01042
    Location:19 → 609
    V-ATPase_V1_A; V-type (H+)-ATPase V1, A subunit

  3. XM_031613140.1 → XP_031469000.1  V-type proton ATPase catalytic subunit A

    UniProtKB/TrEMBL
    A0A669QRT8
    Conserved Domains (1) summary
    TIGR01042
    Location:19 → 609
    V-ATPase_V1_A; V-type (H+)-ATPase V1, A subunit
Nucleotide Protein
Heading Accession and Version

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