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PLA2G12A phospholipase A2 group XIIA [ Phasianus colchicus (ring-necked pheasant) ]

Gene ID: 116231270, updated on 18-Sep-2024

Summary

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Gene symbol
PLA2G12A
Gene description
phospholipase A2 group XIIA
See related
Ensembl:ENSPCLG00000011932
Gene type
protein coding
RefSeq status
MODEL
Organism
Phasianus colchicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Phasianus
Orthologs
human mouse all
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Genomic context

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See PLA2G12A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM414374v1 (GCF_004143745.1) Unplaced Scaffold NW_022205396.1 (13994077..13999010)

NW_022205396.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116231273 Neighboring gene GAR1 ribonucleoprotein Neighboring gene complement factor I Neighboring gene caspase 6 Neighboring gene mitochondrial calcium uniporter dominant negative subunit beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022205396 Unplaced Scaffold Reference ASM414374v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in arachidonate secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
group XIIA secretory phospholipase A2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phasianus colchicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM414374v1 Primary Assembly

Genomic

  1. NW_022205396.1 Reference ASM414374v1 Primary Assembly

    Range
    13994077..13999010
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031596953.1 → XP_031452813.1  group XIIA secretory phospholipase A2

    UniProtKB/TrEMBL
    A0A669Q8C2
    Related
    ENSPCLP00000014578.1, ENSPCLT00000019272.1
    Conserved Domains (1) summary
    pfam06951
    Location:24 → 194
    PLA2G12; Group XII secretory phospholipase A2 precursor (PLA2G12)
Nucleotide Protein
Heading Accession and Version

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