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LOC116230369 torsin-1A-interacting protein 2-like [ Phasianus colchicus (ring-necked pheasant) ]

Gene ID: 116230369, updated on 27-Jul-2024

Summary

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Gene symbol
LOC116230369
Gene description
torsin-1A-interacting protein 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Phasianus colchicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Phasianus
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Genomic context

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See LOC116230369 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ASM414374v1 (GCF_004143745.1) Unplaced Scaffold NW_022205385.1 (1988291..1996084)

NW_022205385.1Genomic Context describing neighboring genes Neighboring gene ADAMTS-like protein 2 Neighboring gene family with sequence similarity 163 member A Neighboring gene torsin 1A interacting protein 2 Neighboring gene centrosomal protein 350 Neighboring gene quiescin sulfhydryl oxidase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022205385 Unplaced Scaffold Reference ASM414374v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phasianus colchicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM414374v1 Primary Assembly

Genomic

  1. NW_022205385.1 Reference ASM414374v1 Primary Assembly

    Range
    1988291..1996084
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031595488.1 → XP_031451348.1  torsin-1A-interacting protein 2-like

    Conserved Domains (2) summary
    PRK07764
    Location:67 → 227
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    pfam05609
    Location:158 → 540
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
Nucleotide Protein
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