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LCT lactase [ Phasianus colchicus (ring-necked pheasant) ]

Gene ID: 116227271, updated on 27-Jul-2024

Summary

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Gene symbol
LCT
Gene description
lactase
See related
Ensembl:ENSPCLG00000005705
Gene type
protein coding
RefSeq status
MODEL
Organism
Phasianus colchicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Phasianus
Orthologs
human mouse all
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Genomic context

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See LCT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current ASM414374v1 (GCF_004143745.1) Unplaced Scaffold NW_022205361.1 (8485967..8503918, complement)

NW_022205361.1Genomic Context describing neighboring genes Neighboring gene R3H domain containing 1 Neighboring gene UBX domain protein 4 Neighboring gene minichromosome maintenance complex component 6 Neighboring gene aspartyl-tRNA synthetase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022205361 Unplaced Scaffold Reference ASM414374v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactase-phlorizin hydrolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phasianus colchicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM414374v1 Primary Assembly

Genomic

  1. NW_022205361.1 Reference ASM414374v1 Primary Assembly

    Range
    8485967..8503918 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031590477.1 → XP_031446337.1  lactase-phlorizin hydrolase

    UniProtKB/TrEMBL
    A0A669PYP3
    Related
    ENSPCLP00000006846.1, ENSPCLT00000009381.1
    Conserved Domains (3) summary
    COG2723
    Location:85 → 213
    BglB; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]
    pfam00232
    Location:1395 → 1860
    Glyco_hydro_1; Glycosyl hydrolase family 1
    cl23725
    Location:919 → 1383
    Glyco_hydro; Glycosyl hydrolases
Nucleotide Protein
Heading Accession and Version

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