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LOC116171266 O-glucosyltransferase rumi homolog [ Photinus pyralis (common eastern firefly) ]

Gene ID: 116171266, updated on 14-Dec-2023

Summary

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Gene symbol
LOC116171266
Gene description
O-glucosyltransferase rumi homolog
Locus tag
PPYR_09684
Gene type
protein coding
RefSeq status
MODEL
Organism
Photinus pyralis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Elateriformia; Elateroidea; Lampyridae; Lampyrinae; Photinus
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Genomic context

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See LOC116171266 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Ppyr1.3 (GCF_008802855.1) Unplaced Scaffold NW_022170596.1 (48342915..48344563, complement)

NW_022170596.1Genomic Context describing neighboring genes Neighboring gene mucin-2-like Neighboring gene Tryptophanyl-tRNA synthetase, mitochondrial Neighboring gene uncharacterized LOC116171435 Neighboring gene ubiquitin-protein ligase E3C Neighboring gene uncharacterized protein F13E9.13, mitochondrial

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022170596 Unplaced Scaffold Reference Ppyr1.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular characterization of firefly nuptial gifts: a multi-omics approach sheds light on postcopulatory sexual selection. Al-Wathiqui N, et al. Sci Rep, 2016 Dec 22. PMID 28004739, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
O-glucosyltransferase rumi homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Photinus pyralis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ppyr1.3

Genomic

  1. NW_022170596.1 Reference Ppyr1.3

    Range
    48342915..48344563 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031488003.1 → XP_031343863.1  O-glucosyltransferase rumi homolog isoform X2

    UniProtKB/TrEMBL
    A0A5N4AN12
    Conserved Domains (1) summary
    cl23835
    Location:68 → 401
    Glyco_transf_90; Glycosyl transferase family 90

  2. XM_031488002.1 → XP_031343862.1  O-glucosyltransferase rumi homolog isoform X1

    UniProtKB/TrEMBL
    A0A5N4AN12
    Conserved Domains (1) summary
    cl23835
    Location:70 → 403
    Glyco_transf_90; Glycosyl transferase family 90

  3. XM_031488004.1 → XP_031343864.1  O-glucosyltransferase rumi homolog isoform X3

    UniProtKB/TrEMBL
    A0A1Y1M5N9
    Conserved Domains (1) summary
    cl23835
    Location:70 → 283
    Glyco_transf_90; Glycosyl transferase family 90
Nucleotide Protein
Heading Accession and Version

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