U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC116159061 carotenoid isomerooxygenase-like [ Photinus pyralis (common eastern firefly) ]

Gene ID: 116159061, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC116159061
Gene description
carotenoid isomerooxygenase-like
Locus tag
PPYR_00568
Gene type
protein coding
RefSeq status
MODEL
Organism
Photinus pyralis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Elateriformia; Elateroidea; Lampyridae; Lampyrinae; Photinus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC116159061 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Ppyr1.3 (GCF_008802855.1) Unplaced Scaffold NW_022170249.1 (16062902..16068841)

NW_022170249.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116172536 Neighboring gene uncharacterized LOC116172544 Neighboring gene uncharacterized LOC116172456 Neighboring gene dimethylaniline monooxygenase [N-oxide-forming] 3-like Neighboring gene senecionine N-oxygenase-like Neighboring gene carotenoid isomerooxygenase-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_022170249 Unplaced Scaffold Reference Ppyr1.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-carotene 15,15'-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carotenoid dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carotene catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retinal metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
carotenoid isomerooxygenase-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Photinus pyralis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ppyr1.3

Genomic

  1. NW_022170249.1 Reference Ppyr1.3

    Range
    16062902..16068841
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031471954.1 → XP_031327814.1  carotenoid isomerooxygenase-like

    UniProtKB/TrEMBL
    A0A5N4B249
    Conserved Domains (1) summary
    pfam03055
    Location:21 → 530
    RPE65; Retinal pigment epithelial membrane protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases