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LOC116152544 ficolin-1 [ Camelus dromedarius (Arabian camel) ]

Gene ID: 116152544, updated on 19-Apr-2024

Summary

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Gene symbol
LOC116152544
Gene description
ficolin-1
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus dromedarius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Also known as
FCN1
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Genomic context

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See LOC116152544 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_04 current mCamDro1.pat (GCF_036321535.1) 10 NC_087445.1 (77818769..77834083, complement)
101 previous assembly CamDro3 (GCF_000803125.2) 4 NC_044514.1 (66759657..66775095, complement)

Chromosome 10 - NC_087445.1Genomic Context describing neighboring genes Neighboring gene retinoid X receptor alpha Neighboring gene collagen type V alpha 1 chain Neighboring gene olfactomedin 1 Neighboring gene uncharacterized LOC116152781

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables antigen binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate derivative binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in complement activation, lectin pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: ficolin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036321535.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCamDro1.pat

Genomic

  1. NC_087445.1 Reference mCamDro1.pat

    Range
    77818769..77834083 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064490897.1 → XP_064346967.1  LOW QUALITY PROTEIN: ficolin-1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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