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LOC116117257 beta-1,6-galactosyltransferase GALT31A-like [ Pistacia vera ]

Gene ID: 116117257, updated on 14-Dec-2023

Summary

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Gene symbol
LOC116117257
Gene description
beta-1,6-galactosyltransferase GALT31A-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Pistacia vera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Anacardiaceae; Pistacia
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Genomic context

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See LOC116117257 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current PisVer_v2 (GCF_008641045.1) Unplaced Scaffold NW_022196669.1 (76439..80971)

NW_022196669.1Genomic Context describing neighboring genes Neighboring gene subtilisin-like protease SBT3.5 Neighboring gene ankyrin repeat and KH domain-containing protein 1-like Neighboring gene beta-1,6-galactosyltransferase GALT31A Neighboring gene uncharacterized LOC116117195

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022196669 Unplaced Scaffold Reference PisVer_v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,6-galactosyltransferase GALT31A-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pistacia vera Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PisVer_v2 Primary Assembly

Genomic

  1. NW_022196669.1 Reference PisVer_v2 Primary Assembly

    Range
    76439..80971
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031403294.1 → XP_031259154.1  beta-1,6-galactosyltransferase GALT31A-like

    Conserved Domains (1) summary
    PLN03193
    Location:11 → 403
    PLN03193; beta-1,3-galactosyltransferase; Provisional
Nucleotide Protein
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