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LOC116101694 torsin-1A-interacting protein 2-like [ Mastomys coucha (southern multimammate mouse) ]

Gene ID: 116101694, updated on 12-Dec-2023

Summary

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Gene symbol
LOC116101694
Gene description
torsin-1A-interacting protein 2-like
See related
EnsemblRapid:ENSMCUG00000002671
Gene type
protein coding
RefSeq status
MODEL
Organism
Mastomys coucha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mastomys
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Genomic context

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See LOC116101694 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current UCSF_Mcou_1 (GCF_008632895.1) Unplaced Scaffold NW_022196891.1 (53226110..53257960)

NW_022196891.1Genomic Context describing neighboring genes Neighboring gene quiescin sulfhydryl oxidase 1 Neighboring gene uncharacterized LOC116101677 Neighboring gene centrosomal protein 350 Neighboring gene torsin 1A interacting protein 1 Neighboring gene torsin-1A-interacting protein 2 Neighboring gene U6 spliceosomal RNA Neighboring gene family with sequence similarity 163 member A Neighboring gene uncharacterized LOC116101760

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022196891 Unplaced Scaffold Reference UCSF_Mcou_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mastomys coucha Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCSF_Mcou_1 Primary Assembly

Genomic

  1. NW_022196891.1 Reference UCSF_Mcou_1 Primary Assembly

    Range
    53226110..53257960
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031385495.1 → XP_031241355.1  torsin-1A-interacting protein 2-like isoform X1

    Conserved Domains (1) summary
    pfam05609
    Location:112 → 555
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  2. XM_031385481.1 → XP_031241341.1  torsin-1A-interacting protein 2-like isoform X1

    Conserved Domains (1) summary
    pfam05609
    Location:112 → 555
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  3. XM_031385490.1 → XP_031241350.1  torsin-1A-interacting protein 2-like isoform X1

    Conserved Domains (1) summary
    pfam05609
    Location:112 → 555
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  4. XM_031385473.1 → XP_031241333.1  torsin-1A-interacting protein 2-like isoform X1

    Related
    ENSMCUP00000003136.1, ENSMCUT00000003838.1

  5. XM_031385500.1 → XP_031241360.1  torsin-1A-interacting protein 2-like isoform X2

    Related
    ENSMCUP00000003141.1, ENSMCUT00000003843.1
    Conserved Domains (1) summary
    pfam05609
    Location:29 → 481
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  6. XM_031385506.1 → XP_031241366.1  torsin-1A-interacting protein 2-like isoform X3

    Conserved Domains (1) summary
    pfam05609
    Location:29 → 481
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
Nucleotide Protein
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