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Mmadhc metabolism of cobalamin associated D [ Mastomys coucha (southern multimammate mouse) ]

Gene ID: 116090154, updated on 18-Mar-2024

Summary

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Gene symbol
Mmadhc
Gene description
metabolism of cobalamin associated D
See related
EnsemblRapid:ENSMCUG00000012896
Gene type
protein coding
RefSeq status
MODEL
Organism
Mastomys coucha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mastomys
Orthologs
human mouse all
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Genomic context

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See Mmadhc in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current UCSF_Mcou_1 (GCF_008632895.1) Unplaced Scaffold NW_022196897.1 (37593242..37611388, complement)

NW_022196897.1Genomic Context describing neighboring genes Neighboring gene LY6/PLAUR domain containing 6B Neighboring gene LY6/PLAUR domain containing 6 Neighboring gene uncharacterized LOC116090155 Neighboring gene uncharacterized LOC116091640 Neighboring gene small nucleolar RNA SNORA48 Neighboring gene ubiquitin-conjugating enzyme E2 variant 1 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022196897 Unplaced Scaffold Reference UCSF_Mcou_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methylmalonic aciduria and homocystinuria type D protein, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mastomys coucha Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCSF_Mcou_1 Primary Assembly

Genomic

  1. NW_022196897.1 Reference UCSF_Mcou_1 Primary Assembly

    Range
    37593242..37611388 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031370196.1 → XP_031226056.1  methylmalonic aciduria and homocystinuria type D protein, mitochondrial

    Conserved Domains (1) summary
    pfam10229
    Location:24 → 293
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  2. XM_031370194.1 → XP_031226054.1  methylmalonic aciduria and homocystinuria type D protein, mitochondrial

    Conserved Domains (1) summary
    pfam10229
    Location:24 → 293
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  3. XM_031370195.1 → XP_031226055.1  methylmalonic aciduria and homocystinuria type D protein, mitochondrial

    Conserved Domains (1) summary
    pfam10229
    Location:24 → 293
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  4. XM_031370193.1 → XP_031226053.1  methylmalonic aciduria and homocystinuria type D protein, mitochondrial

    Related
    ENSMCUP00000014536.1, ENSMCUT00000018821.1
    Conserved Domains (1) summary
    pfam10229
    Location:24 → 293
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein
Nucleotide Protein
Heading Accession and Version

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