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Wdr41 WD repeat domain 41 [ Mastomys coucha (southern multimammate mouse) ]

Gene ID: 116083801, updated on 18-Mar-2024

Summary

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Gene symbol
Wdr41
Gene description
WD repeat domain 41
See related
EnsemblRapid:ENSMCUG00000007332
Gene type
protein coding
RefSeq status
MODEL
Organism
Mastomys coucha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mastomys
Orthologs
human mouse all
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Genomic context

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See Wdr41 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current UCSF_Mcou_1 (GCF_008632895.1) Unplaced Scaffold NW_022196914.1 (55438035..55494311)

NW_022196914.1Genomic Context describing neighboring genes Neighboring gene tubulin folding cofactor A Neighboring gene orthopedia homeobox Neighboring gene uncharacterized protein C9orf85 homolog pseudogene Neighboring gene phosphodiesterase 8B Neighboring gene small nucleolar RNA SNORA47 Neighboring gene zinc finger BED-type containing 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022196914 Unplaced Scaffold Reference UCSF_Mcou_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD repeat-containing protein 41

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mastomys coucha Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCSF_Mcou_1 Primary Assembly

Genomic

  1. NW_022196914.1 Reference UCSF_Mcou_1 Primary Assembly

    Range
    55438035..55494311
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031360588.1 → XP_031216448.1  WD repeat-containing protein 41 isoform X5

    Conserved Domains (2) summary
    sd00039
    Location:71 → 117
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:22 → 334
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_031360587.1 → XP_031216447.1  WD repeat-containing protein 41 isoform X4

  3. XM_031360584.1 → XP_031216444.1  WD repeat-containing protein 41 isoform X1

    Related
    ENSMCUP00000008253.1, ENSMCUT00000010588.1
    Conserved Domains (2) summary
    sd00039
    Location:87 → 133
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:38 → 350
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  4. XM_031360586.1 → XP_031216446.1  WD repeat-containing protein 41 isoform X3

    Conserved Domains (2) summary
    sd00039
    Location:87 → 133
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:38 → 341
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  5. XM_031360585.1 → XP_031216445.1  WD repeat-containing protein 41 isoform X2

    Conserved Domains (2) summary
    sd00039
    Location:82 → 128
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:33 → 345
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  6. XM_031360589.1 → XP_031216449.1  WD repeat-containing protein 41 isoform X6

    Conserved Domains (2) summary
    sd00039
    Location:87 → 133
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:38 → 350
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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