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Alyref Aly/REF export factor [ Mastomys coucha (southern multimammate mouse) ]

Gene ID: 116078149, updated on 18-Mar-2024

Summary

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Gene symbol
Alyref
Gene description
Aly/REF export factor
See related
EnsemblRapid:ENSMCUG00000001637
Gene type
protein coding
RefSeq status
MODEL
Organism
Mastomys coucha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mastomys
Orthologs
human mouse all
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Genomic context

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See Alyref in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current UCSF_Mcou_1 (GCF_008632895.1) Unplaced Scaffold NW_022196911.1 (117172854..117176928, complement)

NW_022196911.1Genomic Context describing neighboring genes Neighboring gene prolyl 4-hydroxylase subunit beta Neighboring gene Rho GDP dissociation inhibitor alpha Neighboring gene anaphase promoting complex subunit 11 Neighboring gene neuropeptide B Neighboring gene phosphate cytidylyltransferase 2, ethanolamine

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022196911 Unplaced Scaffold Reference UCSF_Mcou_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
THO complex subunit 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mastomys coucha Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCSF_Mcou_1 Primary Assembly

Genomic

  1. NW_022196911.1 Reference UCSF_Mcou_1 Primary Assembly

    Range
    117172854..117176928 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031353141.1 → XP_031209001.1  THO complex subunit 4

    Related
    ENSMCUP00000001771.1, ENSMCUT00000002284.1
    Conserved Domains (1) summary
    cd12680
    Location:106 → 179
    RRM_THOC4; RNA recognition motif in THO complex subunit 4 (THOC4) and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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