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Nup107 nucleoporin 107 [ Mastomys coucha (southern multimammate mouse) ]

Gene ID: 116075989, updated on 18-Mar-2024

Summary

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Gene symbol
Nup107
Gene description
nucleoporin 107
See related
EnsemblRapid:ENSMCUG00000006210
Gene type
protein coding
RefSeq status
MODEL
Organism
Mastomys coucha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mastomys
Orthologs
human mouse all
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Genomic context

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See Nup107 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
29
Annotation release Status Assembly Chr Location
100 current UCSF_Mcou_1 (GCF_008632895.1) Unplaced Scaffold NW_022196910.1 (44904390..44947727, complement)

NW_022196910.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S2-like Neighboring gene solute carrier family 35 member E3 Neighboring gene uncharacterized LOC116075992 Neighboring gene RAP1B, member of RAS oncogene family Neighboring gene uncharacterized LOC116076097 Neighboring gene uncharacterized LOC116076098

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022196910 Unplaced Scaffold Reference UCSF_Mcou_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear pore outer ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear pore complex protein Nup107

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mastomys coucha Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCSF_Mcou_1 Primary Assembly

Genomic

  1. NW_022196910.1 Reference UCSF_Mcou_1 Primary Assembly

    Range
    44904390..44947727 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031349534.1 → XP_031205394.1  nuclear pore complex protein Nup107 isoform X1

    Related
    ENSMCUP00000007111.1, ENSMCUT00000008987.1
    Conserved Domains (1) summary
    pfam04121
    Location:210 → 908
    Nup84_Nup100; Nuclear pore protein 84 / 107

  2. XM_031349535.1 → XP_031205395.1  nuclear pore complex protein Nup107 isoform X2

    Conserved Domains (1) summary
    pfam04121
    Location:181 → 879
    Nup84_Nup100; Nuclear pore protein 84 / 107
Nucleotide Protein
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