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LOC116071167 cytochrome c oxidase subunit 7B2, mitochondrial [ Mastomys coucha (southern multimammate mouse) ]

Gene ID: 116071167, updated on 18-Sep-2024

Summary

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Gene symbol
LOC116071167
Gene description
cytochrome c oxidase subunit 7B2, mitochondrial
See related
EnsemblRapid:ENSMCUG00000019723
Gene type
protein coding
RefSeq status
MODEL
Organism
Mastomys coucha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mastomys
Orthologs
human mouse all
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Genomic context

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See LOC116071167 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current UCSF_Mcou_1 (GCF_008632895.1) Unplaced Scaffold NW_022196905.1 (64287849..64384741, complement)

NW_022196905.1Genomic Context describing neighboring genes Neighboring gene gamma-aminobutyric acid type A receptor subunit alpha2 Neighboring gene FYVE, RhoGEF and PH domain-containing protein 1 pseudogene Neighboring gene uncharacterized LOC116071169 Neighboring gene gamma-aminobutyric acid type A receptor subunit alpha4 Neighboring gene uncharacterized LOC116071174 Neighboring gene uncharacterized LOC116071173 Neighboring gene gamma-aminobutyric acid type A receptor subunit beta1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022196905 Unplaced Scaffold Reference UCSF_Mcou_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mitochondrial electron transport, cytochrome c to oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytochrome c oxidase subunit 7B2, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mastomys coucha Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCSF_Mcou_1 Primary Assembly

Genomic

  1. NW_022196905.1 Reference UCSF_Mcou_1 Primary Assembly

    Range
    64287849..64384741 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031342585.1 → XP_031198445.1  cytochrome c oxidase subunit 7B2, mitochondrial

    Conserved Domains (1) summary
    pfam05392
    Location:2 → 79
    COX7B; Cytochrome C oxidase chain VIIB

  2. XM_031342587.1 → XP_031198447.1  cytochrome c oxidase subunit 7B2, mitochondrial

    Related
    ENSMCUP00000022278.1, ENSMCUT00000028845.1
    Conserved Domains (1) summary
    pfam05392
    Location:2 → 79
    COX7B; Cytochrome C oxidase chain VIIB

  3. XM_031342589.1 → XP_031198449.1  cytochrome c oxidase subunit 7B2, mitochondrial

    Related
    ENSMCUP00000022284.1, ENSMCUT00000028853.1
    Conserved Domains (1) summary
    pfam05392
    Location:2 → 79
    COX7B; Cytochrome C oxidase chain VIIB

  4. XM_031342588.1 → XP_031198448.1  cytochrome c oxidase subunit 7B2, mitochondrial

    Related
    ENSMCUP00000022283.1, ENSMCUT00000028852.1

  5. XM_031342586.1 → XP_031198446.1  cytochrome c oxidase subunit 7B2, mitochondrial

    Related
    ENSMCUP00000022273.1, ENSMCUT00000028838.1
    Conserved Domains (1) summary
    pfam05392
    Location:2 → 79
    COX7B; Cytochrome C oxidase chain VIIB

  6. XM_031342590.1 → XP_031198450.1  cytochrome c oxidase subunit 7B2, mitochondrial

    Conserved Domains (1) summary
    pfam05392
    Location:2 → 79
    COX7B; Cytochrome C oxidase chain VIIB

RNA

  1. XR_004110739.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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