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Psmd7 proteasome 26S subunit, non-ATPase 7 [ Mastomys coucha (southern multimammate mouse) ]

Gene ID: 116070128, updated on 18-Mar-2024

Summary

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Gene symbol
Psmd7
Gene description
proteasome 26S subunit, non-ATPase 7
See related
EnsemblRapid:ENSMCUG00000021466
Gene type
protein coding
RefSeq status
MODEL
Organism
Mastomys coucha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mastomys
Orthologs
human mouse all
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Genomic context

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See Psmd7 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current UCSF_Mcou_1 (GCF_008632895.1) Unplaced Scaffold NW_022196905.1 (245685860..245694183, complement)

NW_022196905.1Genomic Context describing neighboring genes Neighboring gene atherin Neighboring gene uncharacterized LOC116070127 Neighboring gene WW domain containing E3 ubiquitin protein ligase 2 Neighboring gene uncharacterized LOC116068032 Neighboring gene 60S ribosomal protein L18a pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022196905 Unplaced Scaffold Reference UCSF_Mcou_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metallopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of proteasome complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome regulatory particle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
26S proteasome non-ATPase regulatory subunit 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mastomys coucha Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCSF_Mcou_1 Primary Assembly

Genomic

  1. NW_022196905.1 Reference UCSF_Mcou_1 Primary Assembly

    Range
    245685860..245694183 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031341350.1 → XP_031197210.1  26S proteasome non-ATPase regulatory subunit 7 isoform X1

    Related
    ENSMCUP00000024276.1, ENSMCUT00000031324.1
    Conserved Domains (1) summary
    cd08062
    Location:7 → 285
    MPN_RPN7_8; Mpr1p, Pad1p N-terminal (MPN) domains without catalytic isopeptidase activity, found in 19S proteasomal subunits Rpn7 and Rpn8

  2. XM_031341352.1 → XP_031197212.1  26S proteasome non-ATPase regulatory subunit 7 isoform X3

    Related
    ENSMCUP00000024272.1, ENSMCUT00000031320.1
    Conserved Domains (1) summary
    cd08062
    Location:2 → 262
    MPN_RPN7_8; Mpr1p, Pad1p N-terminal (MPN) domains without catalytic isopeptidase activity, found in 19S proteasomal subunits Rpn7 and Rpn8

  3. XM_031341351.1 → XP_031197211.1  26S proteasome non-ATPase regulatory subunit 7 isoform X2

    Related
    ENSMCUP00000024270.1, ENSMCUT00000031318.1
    Conserved Domains (1) summary
    cd08062
    Location:7 → 262
    MPN_RPN7_8; Mpr1p, Pad1p N-terminal (MPN) domains without catalytic isopeptidase activity, found in 19S proteasomal subunits Rpn7 and Rpn8
Nucleotide Protein
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