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Nup93 nucleoporin 93 [ Mastomys coucha (southern multimammate mouse) ]

Gene ID: 116069897, updated on 18-Mar-2024

Summary

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Gene symbol
Nup93
Gene description
nucleoporin 93
See related
EnsemblRapid:ENSMCUG00000025426
Gene type
protein coding
RefSeq status
MODEL
Organism
Mastomys coucha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mastomys
Orthologs
human mouse all
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Genomic context

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See Nup93 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
100 current UCSF_Mcou_1 (GCF_008632895.1) Unplaced Scaffold NW_022196905.1 (232576256..232679806)

NW_022196905.1Genomic Context describing neighboring genes Neighboring gene metallothionein-2 Neighboring gene metallothionein-1 Neighboring gene U6 spliceosomal RNA Neighboring gene E3 SUMO-protein ligase NSE2 pseudogene Neighboring gene solute carrier family 12 member 3 Neighboring gene uncharacterized LOC116069898

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022196905 Unplaced Scaffold Reference UCSF_Mcou_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in poly(A)+ mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear pore complex protein Nup93

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mastomys coucha Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCSF_Mcou_1 Primary Assembly

Genomic

  1. NW_022196905.1 Reference UCSF_Mcou_1 Primary Assembly

    Range
    232576256..232679806
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031340902.1 → XP_031196762.1  nuclear pore complex protein Nup93 isoform X1

    Related
    ENSMCUP00000028950.1, ENSMCUT00000037041.1
    Conserved Domains (1) summary
    pfam04097
    Location:220 → 802
    Nic96; Nup93/Nic96

  2. XM_031340903.1 → XP_031196763.1  nuclear pore complex protein Nup93 isoform X1

    Related
    ENSMCUP00000028953.1, ENSMCUT00000037043.1
    Conserved Domains (1) summary
    pfam04097
    Location:220 → 802
    Nic96; Nup93/Nic96

  3. XM_031340904.1 → XP_031196764.1  nuclear pore complex protein Nup93 isoform X1

    Conserved Domains (1) summary
    pfam04097
    Location:220 → 802
    Nic96; Nup93/Nic96

  4. XM_031340905.1 → XP_031196765.1  nuclear pore complex protein Nup93 isoform X2

    Conserved Domains (1) summary
    pfam04097
    Location:97 → 679
    Nic96; Nup93/Nic96
Nucleotide Protein
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