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zgc:154054 Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B-like [ Sander lucioperca (pikeperch) ]

Gene ID: 116064265, updated on 21-Aug-2024

Summary

Gene symbol
zgc:154054
Gene description
Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B-like
See related
EnsemblRapid:ENSSLUG00000021867
Gene type
protein coding
RefSeq status
MODEL
Organism
Sander lucioperca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Luciopercinae; Sander
Orthologs
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Genomic context

See zgc:154054 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
17
Annotation release Status Assembly Chr Location
101 current SLUC_FBN_1.2 (GCF_008315115.2) 1 NC_050173.1 (39236865..39267068, complement)
100 previous assembly SLUC_FBN_1 (GCF_008315115.1) Unplaced Scaffold NW_022173012.1 (1539953..1570085)

Chromosome 1 - NC_050173.1Genomic Context describing neighboring genes Neighboring gene SET domain containing 7, histone lysine methyltransferase Neighboring gene short coiled-coil protein B-like Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene matrix metallopeptidase 17b Neighboring gene F-BAR and double SH3 domains protein 1-like

Genomic regions, transcripts, and products

General protein information

Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sander lucioperca Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SLUC_FBN_1.2 Primary Assembly

Genomic

  1. NC_050173.1 Reference SLUC_FBN_1.2 Primary Assembly

    Range
    39236865..39267068 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036004157.1XP_035860050.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B isoform X3

    UniProtKB/TrEMBL
    A0A8D0DAA0
    Related
    ENSSLUP00000050360.1, ENSSLUT00000051852.2
    Conserved Domains (1) summary
    pfam04666
    Location:75347
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region
  2. XM_031319338.2XP_031175198.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B isoform X2

    UniProtKB/TrEMBL
    A0A8D0DA98, A0A8D0DAA0
    Related
    ENSSLUP00000050348.1, ENSSLUT00000051839.2
    Conserved Domains (1) summary
    pfam04666
    Location:101373
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region
  3. XM_031319339.2XP_031175199.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B isoform X4

    UniProtKB/TrEMBL
    A0A8D0DAA0
    Conserved Domains (1) summary
    pfam04666
    Location:109343
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region
  4. XM_031319337.2XP_031175197.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B isoform X1

    UniProtKB/TrEMBL
    A0A8D0DAA0
    Related
    ENSSLUP00000069114.1, ENSSLUT00000071703.1
    Conserved Domains (1) summary
    pfam04666
    Location:109381
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region