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large2 LARGE xylosyl- and glucuronyltransferase 2 [ Sander lucioperca (pikeperch) ]

Gene ID: 116061892, updated on 21-Aug-2024

Summary

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Gene symbol
large2
Gene description
LARGE xylosyl- and glucuronyltransferase 2
See related
EnsemblRapid:ENSSLUG00000003526
Gene type
protein coding
RefSeq status
MODEL
Organism
Sander lucioperca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Luciopercinae; Sander
Orthologs
zebrafish all
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Genomic context

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See large2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
14
Annotation release Status Assembly Chr Location
101 current SLUC_FBN_1.2 (GCF_008315115.2) 3 NC_050175.1 (5205977..5241573)
100 previous assembly SLUC_FBN_1 (GCF_008315115.1) Unplaced Scaffold NW_022172952.1 (247039..282496)

Chromosome 3 - NC_050175.1Genomic Context describing neighboring genes Neighboring gene G patch domain-containing protein 1-like Neighboring gene uncharacterized LOC118494683 Neighboring gene E3 SUMO-protein ligase KIAA1586-like Neighboring gene uncharacterized LOC118494680

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LARGE xylosyl- and glucuronyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sander lucioperca Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SLUC_FBN_1.2 Primary Assembly

Genomic

  1. NC_050175.1 Reference SLUC_FBN_1.2 Primary Assembly

    Range
    5205977..5241573
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031316270.2 → XP_031172130.1  LARGE xylosyl- and glucuronyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C9XGJ9
    Related
    ENSSLUP00000010320.2, ENSSLUT00000010645.2
    Conserved Domains (2) summary
    cd06431
    Location:132 → 411
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:467 → 736
    Glyco_transf_49; Glycosyl-transferase for dystroglycan

  2. XM_031316271.2 → XP_031172131.1  LARGE xylosyl- and glucuronyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C9XGJ9
    Conserved Domains (2) summary
    cd06431
    Location:132 → 411
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:465 → 734
    Glyco_transf_49; Glycosyl-transferase for dystroglycan
Nucleotide Protein
Heading Accession and Version

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