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mmadhca metabolism of cobalamin associated Da [ Sander lucioperca (pikeperch) ]

Gene ID: 116044597, updated on 21-Aug-2024

Summary

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Gene symbol
mmadhca
Gene description
metabolism of cobalamin associated Da
See related
EnsemblRapid:ENSSLUG00000025676
Gene type
protein coding
RefSeq status
MODEL
Organism
Sander lucioperca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Luciopercinae; Sander
Orthologs
zebrafish all
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Genomic context

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See mmadhca in Genome Data Viewer
Location:
chromosome: 24
Exon count:
8
Annotation release Status Assembly Chr Location
101 current SLUC_FBN_1.2 (GCF_008315115.2) 24 NC_050196.1 (12923599..12928761)
100 previous assembly SLUC_FBN_1 (GCF_008315115.1) Unplaced Scaffold NW_022173611.1 (7900135..7905280)

Chromosome 24 - NC_050196.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116044587 Neighboring gene Rho family GTPase 3a Neighboring gene LY6/PLAUR domain containing 6 Neighboring gene paraspeckle component 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
metabolism of cobalamin associated Da

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sander lucioperca Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SLUC_FBN_1.2 Primary Assembly

Genomic

  1. NC_050196.1 Reference SLUC_FBN_1.2 Primary Assembly

    Range
    12923599..12928761
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031291923.2 → XP_031147783.1  metabolism of cobalamin associated Da

    UniProtKB/TrEMBL
    A0A8D0ATM7
    Related
    ENSSLUP00000060173.1, ENSSLUT00000061870.2
    Conserved Domains (1) summary
    pfam10229
    Location:27 → 290
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein
Nucleotide Protein
Heading Accession and Version

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