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dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic [ Sander lucioperca (pikeperch) ]

Gene ID: 116041055, updated on 21-Aug-2024

Summary

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Gene symbol
dpm1
Gene description
dolichyl-phosphate mannosyltransferase subunit 1, catalytic
See related
EnsemblRapid:ENSSLUG00000004871
Gene type
protein coding
RefSeq status
MODEL
Organism
Sander lucioperca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Luciopercinae; Sander
Orthologs
human zebrafish all
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Genomic context

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See dpm1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
9
Annotation release Status Assembly Chr Location
101 current SLUC_FBN_1.2 (GCF_008315115.2) 12 NC_050184.1 (16246593..16251608)
100 previous assembly SLUC_FBN_1 (GCF_008315115.1) Unplaced Scaffold NW_022173389.1 (1387874..1392847, complement)

Chromosome 12 - NC_050184.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 35 member C2 Neighboring gene collagen alpha-1(XX) chain Neighboring gene uncharacterized LOC116040650 Neighboring gene activity-dependent neuroprotector homeobox b Neighboring gene par-6 partitioning defective 6 homolog beta (C. elegans)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate beta-D-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dolichol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichol-phosphate mannosyltransferase subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sander lucioperca Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SLUC_FBN_1.2 Primary Assembly

Genomic

  1. NC_050184.1 Reference SLUC_FBN_1.2 Primary Assembly

    Range
    16246593..16251608
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031286883.2 → XP_031142743.1  dolichol-phosphate mannosyltransferase subunit 1

    UniProtKB/TrEMBL
    A0A8C9XIH6, A0A8D0CTK4
    Related
    ENSSLUP00000010335.1, ENSSLUT00000010660.2
    Conserved Domains (1) summary
    PLN02726
    Location:11 → 250
    PLN02726; dolichyl-phosphate beta-D-mannosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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