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zbtb44 zinc finger and BTB domain containing 44 [ Sander lucioperca (pikeperch) ]

Gene ID: 116038918, updated on 21-Aug-2024

Summary

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Gene symbol
zbtb44
Gene description
zinc finger and BTB domain containing 44
See related
EnsemblRapid:ENSSLUG00000008380
Gene type
protein coding
RefSeq status
MODEL
Organism
Sander lucioperca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Luciopercinae; Sander
Orthologs
human zebrafish all
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Genomic context

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See zbtb44 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
101 current SLUC_FBN_1.2 (GCF_008315115.2) 5 NC_050177.1 (35391447..35407503)
100 previous assembly SLUC_FBN_1 (GCF_008315115.1) Unplaced Scaffold NW_022173279.1 (4015351..4031398, complement)

Chromosome 5 - NC_050177.1Genomic Context describing neighboring genes Neighboring gene A disintegrin and metalloproteinase with thrombospondin motifs 15 Neighboring gene A disintegrin and metalloproteinase with thrombospondin motifs 8 Neighboring gene uncharacterized protein C11orf53 homolog Neighboring gene uncharacterized LOC116038931 Neighboring gene lnc RNA pou2af1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 44

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sander lucioperca Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SLUC_FBN_1.2 Primary Assembly

Genomic

  1. NC_050177.1 Reference SLUC_FBN_1.2 Primary Assembly

    Range
    35391447..35407503
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031283631.2 → XP_031139491.1  zinc finger and BTB domain-containing protein 44 isoform X5

    Conserved Domains (4) summary
    COG5048
    Location:50 → 114
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:66 → 86
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:154 → 176
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:78 → 103
    zf-H2C2_2; Zinc-finger double domain

  2. XM_031283632.2 → XP_031139492.1  zinc finger and BTB domain-containing protein 44 isoform X6

    Conserved Domains (4) summary
    COG5048
    Location:40 → 104
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:56 → 76
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:144 → 166
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:68 → 93
    zf-H2C2_2; Zinc-finger double domain

  3. XM_031283627.2 → XP_031139487.1  zinc finger and BTB domain-containing protein 44 isoform X1

    Conserved Domains (6) summary
    COG5048
    Location:408 → 472
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:312 → 472
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:424 → 444
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:512 → 534
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:12 → 129
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam13465
    Location:436 → 461
    zf-H2C2_2; Zinc-finger double domain

  4. XM_031283629.2 → XP_031139489.1  zinc finger and BTB domain-containing protein 44 isoform X2

    Related
    ENSSLUP00000017938.2, ENSSLUT00000018507.2
    Conserved Domains (6) summary
    COG5048
    Location:398 → 462
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:312 → 462
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:414 → 434
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:502 → 524
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:12 → 129
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam13465
    Location:426 → 451
    zf-H2C2_2; Zinc-finger double domain

  5. XM_031283630.2 → XP_031139490.1  zinc finger and BTB domain-containing protein 44 isoform X3

    Conserved Domains (5) summary
    COG5048
    Location:408 → 472
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:312 → 472
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:424 → 444
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:12 → 129
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam13465
    Location:436 → 461
    zf-H2C2_2; Zinc-finger double domain

  6. XM_036001297.1 → XP_035857190.1  zinc finger and BTB domain-containing protein 44 isoform X4

    UniProtKB/TrEMBL
    A0A8C9Y5G6
    Related
    ENSSLUP00000069507.1, ENSSLUT00000078417.1
    Conserved Domains (5) summary
    COG5189
    Location:312 → 462
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:414 → 434
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:12 → 129
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam00096
    Location:412 → 434
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:426 → 451
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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