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LOC116032534 probable starch synthase 4, chloroplastic/amyloplastic [ Ipomoea triloba (trilobed morning glory) ]

Gene ID: 116032534, updated on 18-Sep-2024

Summary

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Gene symbol
LOC116032534
Gene description
probable starch synthase 4, chloroplastic/amyloplastic
Gene type
protein coding
RefSeq status
MODEL
Organism
Ipomoea triloba
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Genomic context

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See LOC116032534 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
16
Annotation release Status Assembly Chr Location
100 current ASM357664v1 (GCF_003576645.1) 10 NC_044925.1 (4093701..4102142)

Chromosome 10 - NC_044925.1Genomic Context describing neighboring genes Neighboring gene purine permease 21-like Neighboring gene UDP-N-acetylglucosamine transferase subunit ALG14 homolog Neighboring gene chlorophyll a-b binding protein of LHCII type 1-like Neighboring gene chlorophyll a-b binding protein of LHCII type 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044925.1 Chromosome 10 Reference ASM357664v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable starch synthase 4, chloroplastic/amyloplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ipomoea triloba Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM357664v1 Primary Assembly

Genomic

  1. NC_044925.1 Reference ASM357664v1 Primary Assembly

    Range
    4093701..4102142
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031275137.1 → XP_031130997.1  probable starch synthase 4, chloroplastic/amyloplastic isoform X2

    Conserved Domains (1) summary
    PLN02939
    Location:1 → 1084
    PLN02939; transferase, transferring glycosyl groups

  2. XM_031275136.1 → XP_031130996.1  probable starch synthase 4, chloroplastic/amyloplastic isoform X1

    Conserved Domains (1) summary
    PLN02939
    Location:1 → 1091
    PLN02939; transferase, transferring glycosyl groups
Nucleotide Protein
Heading Accession and Version

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