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LOC116030267 probable galacturonosyltransferase 7 [ Ipomoea triloba (trilobed morning glory) ]

Gene ID: 116030267, updated on 14-Dec-2023

Summary

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Gene symbol
LOC116030267
Gene description
probable galacturonosyltransferase 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Ipomoea triloba
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Genomic context

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See LOC116030267 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM357664v1 (GCF_003576645.1) 9 NC_044924.1 (6933399..6938618, complement)

Chromosome 9 - NC_044924.1Genomic Context describing neighboring genes Neighboring gene bifunctional protein FolD 1, mitochondrial-like Neighboring gene protein SCARECROW-like Neighboring gene syntaxin-132-like Neighboring gene protein QUIRKY

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044924.1 Chromosome 9 Reference ASM357664v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ipomoea triloba Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM357664v1 Primary Assembly

Genomic

  1. NC_044924.1 Reference ASM357664v1 Primary Assembly

    Range
    6933399..6938618 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031272461.1 → XP_031128321.1  probable galacturonosyltransferase 7 isoform X1

    Conserved Domains (1) summary
    PLN02769
    Location:7 → 620
    PLN02769; Probable galacturonosyltransferase

  2. XM_031272462.1 → XP_031128322.1  probable galacturonosyltransferase 7 isoform X2

    Conserved Domains (1) summary
    PLN02769
    Location:56 → 534
    PLN02769; Probable galacturonosyltransferase
Nucleotide Protein
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