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LOC116030081 alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase [ Ipomoea triloba (trilobed morning glory) ]

Gene ID: 116030081, updated on 14-Dec-2023

Summary

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Gene symbol
LOC116030081
Gene description
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Ipomoea triloba
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Genomic context

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See LOC116030081 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
19
Annotation release Status Assembly Chr Location
100 current ASM357664v1 (GCF_003576645.1) 9 NC_044924.1 (176420..185981, complement)

Chromosome 9 - NC_044924.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116028832 Neighboring gene calcium-dependent protein kinase 5 Neighboring gene probable serine/threonine-protein kinase PIX13 Neighboring gene pentatricopeptide repeat-containing protein At2g17210 Neighboring gene protein NLP2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044924.1 Chromosome 9 Reference ASM357664v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ipomoea triloba Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM357664v1 Primary Assembly

Genomic

  1. NC_044924.1 Reference ASM357664v1 Primary Assembly

    Range
    176420..185981 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031272200.1 → XP_031128060.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase isoform X2

    Conserved Domains (1) summary
    cl11394
    Location:21 → 433
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_031272199.1 → XP_031128059.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase isoform X1

    Conserved Domains (1) summary
    cl11394
    Location:21 → 450
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_031272202.1 → XP_031128062.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase isoform X3

    Conserved Domains (1) summary
    cl11394
    Location:1 → 371
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  4. XM_031272201.1 → XP_031128061.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase isoform X3

    Conserved Domains (1) summary
    cl11394
    Location:1 → 371
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  5. XM_031272203.1 → XP_031128063.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase isoform X4

    Conserved Domains (1) summary
    cl11394
    Location:21 → 357
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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