U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC116026953 arabinosyltransferase RRA3-like [ Ipomoea triloba (trilobed morning glory) ]

Gene ID: 116026953, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC116026953
Gene description
arabinosyltransferase RRA3-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ipomoea triloba
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC116026953 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ASM357664v1 (GCF_003576645.1) 1 NC_044916.1 (37132926..37135361, complement)

Chromosome 1 - NC_044916.1Genomic Context describing neighboring genes Neighboring gene SPX and EXS domain-containing protein 5-like Neighboring gene APO protein 4, mitochondrial-like Neighboring gene probable protein phosphatase 2C 55 Neighboring gene cytochrome P450 734A1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_044916.1 Chromosome 1 Reference ASM357664v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in root hair cell development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
arabinosyltransferase RRA3-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ipomoea triloba Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM357664v1 Primary Assembly

Genomic

  1. NC_044916.1 Reference ASM357664v1 Primary Assembly

    Range
    37132926..37135361 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031268381.1 → XP_031124241.1  arabinosyltransferase RRA3-like

    Conserved Domains (1) summary
    pfam03407
    Location:183 → 406
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases