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LOC116022851 probable galacturonosyltransferase 4 [ Ipomoea triloba (trilobed morning glory) ]

Gene ID: 116022851, updated on 14-Dec-2023

Summary

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Gene symbol
LOC116022851
Gene description
probable galacturonosyltransferase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Ipomoea triloba
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Genomic context

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See LOC116022851 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM357664v1 (GCF_003576645.1) 6 NC_044921.1 (15203163..15207312, complement)

Chromosome 6 - NC_044921.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase WAV3-like Neighboring gene uncharacterized LOC116023537 Neighboring gene subtilisin-like protease SBT5.4 Neighboring gene uncharacterized LOC116021951

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044921.1 Chromosome 6 Reference ASM357664v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ipomoea triloba Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM357664v1 Primary Assembly

Genomic

  1. NC_044921.1 Reference ASM357664v1 Primary Assembly

    Range
    15203163..15207312 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031263737.1 → XP_031119597.1  probable galacturonosyltransferase 4

    Conserved Domains (1) summary
    PLN02829
    Location:18 → 634
    PLN02829; Probable galacturonosyltransferase
Nucleotide Protein
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