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LOC116020052 glucomannan 4-beta-mannosyltransferase 9-like [ Ipomoea triloba (trilobed morning glory) ]

Gene ID: 116020052, updated on 14-Dec-2023

Summary

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Gene symbol
LOC116020052
Gene description
glucomannan 4-beta-mannosyltransferase 9-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ipomoea triloba
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Genomic context

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See LOC116020052 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM357664v1 (GCF_003576645.1) 5 NC_044920.1 (5684507..5691937, complement)

Chromosome 5 - NC_044920.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116019831 Neighboring gene glucomannan 4-beta-mannosyltransferase 9-like Neighboring gene uncharacterized LOC116019833 Neighboring gene glucomannan 4-beta-mannosyltransferase 9-like Neighboring gene glucomannan 4-beta-mannosyltransferase 9-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044920.1 Chromosome 5 Reference ASM357664v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucomannan 4-beta-mannosyltransferase 9-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ipomoea triloba Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM357664v1 Primary Assembly

Genomic

  1. NC_044920.1 Reference ASM357664v1 Primary Assembly

    Range
    5684507..5691937 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031260510.1 → XP_031116370.1  glucomannan 4-beta-mannosyltransferase 9-like

    Conserved Domains (1) summary
    cd06437
    Location:104 → 340
    CESA_CaSu_A2; Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex
Nucleotide Protein
Heading Accession and Version

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