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LOC116019607 probable galacturonosyltransferase 14 [ Ipomoea triloba (trilobed morning glory) ]

Gene ID: 116019607, updated on 14-Dec-2023

Summary

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Gene symbol
LOC116019607
Gene description
probable galacturonosyltransferase 14
Gene type
protein coding
RefSeq status
MODEL
Organism
Ipomoea triloba
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Genomic context

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See LOC116019607 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM357664v1 (GCF_003576645.1) 5 NC_044920.1 (23912803..23918459, complement)

Chromosome 5 - NC_044920.1Genomic Context describing neighboring genes Neighboring gene chaperone protein ClpB3, chloroplastic-like Neighboring gene membrane-anchored ubiquitin-fold protein 2-like Neighboring gene alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic Neighboring gene uncharacterized LOC116020858

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044920.1 Chromosome 5 Reference ASM357664v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ipomoea triloba Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM357664v1 Primary Assembly

Genomic

  1. NC_044920.1 Reference ASM357664v1 Primary Assembly

    Range
    23912803..23918459 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031259881.1 → XP_031115741.1  probable galacturonosyltransferase 14 isoform X2

    Conserved Domains (1) summary
    PLN02870
    Location:1 → 526
    PLN02870; Probable galacturonosyltransferase

  2. XM_031259880.1 → XP_031115740.1  probable galacturonosyltransferase 14 isoform X1

    Conserved Domains (1) summary
    PLN02870
    Location:1 → 534
    PLN02870; Probable galacturonosyltransferase
Nucleotide Protein
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