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LOC116014222 beta-1,3-galactosyltransferase 7-like [ Ipomoea triloba (trilobed morning glory) ]

Gene ID: 116014222, updated on 14-Dec-2023

Summary

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Gene symbol
LOC116014222
Gene description
beta-1,3-galactosyltransferase 7-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ipomoea triloba
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Genomic context

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See LOC116014222 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM357664v1 (GCF_003576645.1) 3 NC_044918.1 (27156217..27159563)

Chromosome 3 - NC_044918.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin ligase BIG BROTHER-related-like Neighboring gene STOREKEEPER protein-like Neighboring gene uncharacterized LOC116013161 Neighboring gene G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 Neighboring gene oxysterol-binding protein-related protein 1C-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044918.1 Chromosome 3 Reference ASM357664v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 7-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ipomoea triloba Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM357664v1 Primary Assembly

Genomic

  1. NC_044918.1 Reference ASM357664v1 Primary Assembly

    Range
    27156217..27159563
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031254234.1 → XP_031110094.1  beta-1,3-galactosyltransferase 7-like

    Conserved Domains (1) summary
    PLN03193
    Location:11 → 404
    PLN03193; beta-1,3-galactosyltransferase; Provisional
Nucleotide Protein
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