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LOC115999803 sulfoquinovosyl transferase SQD2-like [ Ipomoea triloba (trilobed morning glory) ]

Gene ID: 115999803, updated on 14-Dec-2023

Summary

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Gene symbol
LOC115999803
Gene description
sulfoquinovosyl transferase SQD2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ipomoea triloba
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Genomic context

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See LOC115999803 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM357664v1 (GCF_003576645.1) 12 NC_044927.1 (8965290..8970380, complement)

Chromosome 12 - NC_044927.1Genomic Context describing neighboring genes Neighboring gene proteasome subunit alpha type-4-like Neighboring gene laccase-4-like Neighboring gene glycerol-3-phosphate 2-O-acyltransferase 6-like Neighboring gene uncharacterized LOC115997937

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044927.1 Chromosome 12 Reference ASM357664v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sulfoquinovosyl transferase SQD2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ipomoea triloba Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM357664v1 Primary Assembly

Genomic

  1. NC_044927.1 Reference ASM357664v1 Primary Assembly

    Range
    8965290..8970380 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031239721.1 → XP_031095581.1  sulfoquinovosyl transferase SQD2-like

    Conserved Domains (1) summary
    PLN02871
    Location:53 → 504
    PLN02871; UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Nucleotide Protein
Heading Accession and Version

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