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LOC115997560 probable galacturonosyltransferase 11 [ Ipomoea triloba (trilobed morning glory) ]

Gene ID: 115997560, updated on 14-Dec-2023

Summary

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Gene symbol
LOC115997560
Gene description
probable galacturonosyltransferase 11
Gene type
protein coding
RefSeq status
MODEL
Organism
Ipomoea triloba
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Genomic context

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See LOC115997560 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ASM357664v1 (GCF_003576645.1) 11 NC_044926.1 (10821403..10826047, complement)

Chromosome 11 - NC_044926.1Genomic Context describing neighboring genes Neighboring gene flavonol 3-sulfotransferase-like Neighboring gene flavonol 4'-sulfotransferase-like Neighboring gene uncharacterized LOC115997488 Neighboring gene MADS-box protein SVP-like Neighboring gene dynein light chain 1, cytoplasmic-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044926.1 Chromosome 11 Reference ASM357664v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ipomoea triloba Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM357664v1 Primary Assembly

Genomic

  1. NC_044926.1 Reference ASM357664v1 Primary Assembly

    Range
    10821403..10826047 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031237141.1 → XP_031093001.1  probable galacturonosyltransferase 11

    Conserved Domains (1) summary
    PLN02742
    Location:1 → 537
    PLN02742; Probable galacturonosyltransferase
Nucleotide Protein
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