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LOC115977345 GPI mannosyltransferase 3 [ Quercus lobata ]

Gene ID: 115977345, updated on 14-Dec-2023

Summary

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Gene symbol
LOC115977345
Gene description
GPI mannosyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Quercus lobata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Genomic context

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Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ValleyOak3.0 (GCF_001633185.1) 2 NC_044905.1 (95647677..95653642, complement)

Chromosome 2 - NC_044905.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L13a-4-like Neighboring gene VAN3-binding protein Neighboring gene cation/H(+) antiporter 4-like Neighboring gene uncharacterized LOC115977346

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044905.1 Chromosome 2 Reference ValleyOak3.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Quercus lobata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ValleyOak3.0

Genomic

  1. NC_044905.1 Reference ValleyOak3.0

    Range
    95647677..95653642 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031099161.1 → XP_030955021.1  GPI mannosyltransferase 3 isoform X1

    UniProtKB/TrEMBL
    A0A7N2R0A3
    Conserved Domains (1) summary
    cl21590
    Location:31 → 533
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_031099162.1 → XP_030955022.1  GPI mannosyltransferase 3 isoform X1

    UniProtKB/TrEMBL
    A0A7N2R0A3
    Conserved Domains (1) summary
    cl21590
    Location:31 → 533
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  3. XM_031099163.1 → XP_030955023.1  GPI mannosyltransferase 3 isoform X2

    Conserved Domains (1) summary
    cl21590
    Location:31 → 532
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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