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LOC115968603 glycerate dehydrogenase [ Quercus lobata ]

Gene ID: 115968603, updated on 19-Jun-2024

Summary

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Gene symbol
LOC115968603
Gene description
glycerate dehydrogenase
Gene type
protein coding
RefSeq status
MODEL
Organism
Quercus lobata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Genomic context

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See LOC115968603 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
13
Annotation release Status Assembly Chr Location
100 current ValleyOak3.0 (GCF_001633185.1) 11 NC_044914.1 (50726153..50729932)

Chromosome 11 - NC_044914.1Genomic Context describing neighboring genes Neighboring gene CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1-like Neighboring gene uncharacterized LOC115968813 Neighboring gene SKP1-like protein 1B Neighboring gene SKP1-like protein 1A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044914.1 Chromosome 11 Reference ValleyOak3.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glyoxylate reductase (NADPH) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydroxypyruvate reductase (NADH) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydroxypyruvate reductase [NAD(P)H] activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycerate dehydrogenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Quercus lobata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ValleyOak3.0

Genomic

  1. NC_044914.1 Reference ValleyOak3.0

    Range
    50726153..50729932
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031088032.1 → XP_030943892.1  glycerate dehydrogenase

    Conserved Domains (1) summary
    PLN02306
    Location:1 → 386
    PLN02306; hydroxypyruvate reductase
Nucleotide Protein
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