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LOC115967241 glycine cleavage system H protein 2, mitochondrial-like [ Quercus lobata ]

Gene ID: 115967241, updated on 14-Dec-2023

Summary

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Gene symbol
LOC115967241
Gene description
glycine cleavage system H protein 2, mitochondrial-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Quercus lobata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Genomic context

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See LOC115967241 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ValleyOak3.0 (GCF_001633185.1) 11 NC_044914.1 (16624415..16634253)

Chromosome 11 - NC_044914.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115967244 Neighboring gene uncharacterized LOC115967245 Neighboring gene (-)-germacrene D synthase-like Neighboring gene (-)-germacrene D synthase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044914.1 Chromosome 11 Reference ValleyOak3.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in glycine decarboxylation via glycine cleavage system IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein lipoylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of glycine cleavage complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycine cleavage system H protein 2, mitochondrial-like; glycine cleavage system H protein-like; uncharacterized protein LOC115967241

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Quercus lobata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ValleyOak3.0

Genomic

  1. NC_044914.1 Reference ValleyOak3.0

    Range
    16624415..16634253
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031086304.1 → XP_030942164.1  glycine cleavage system H protein 2, mitochondrial-like isoform X5

    Conserved Domains (2) summary
    cl11404
    Location:5 → 110
    Biotinyl_lipoyl_domains; Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases, and the H-protein of the glycine cleavage system (GCS). These domains transport CO2, acyl, ...
    cl21562
    Location:97 → 169
    DDE_Tnp_4; DDE superfamily endonuclease

  2. XM_031086302.1 → XP_030942162.1  glycine cleavage system H protein-like isoform X3

    Conserved Domains (2) summary
    cl11404
    Location:5 → 88
    Biotinyl_lipoyl_domains; Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases, and the H-protein of the glycine cleavage system (GCS). These domains transport CO2, acyl, ...
    cl23759
    Location:97 → 169
    GT1; myb-like, SANT family

  3. XM_031086303.1 → XP_030942163.1  glycine cleavage system H protein 2, mitochondrial-like isoform X4

    Conserved Domains (2) summary
    cl11404
    Location:5 → 88
    Biotinyl_lipoyl_domains; Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases, and the H-protein of the glycine cleavage system (GCS). These domains transport CO2, acyl, ...
    cl23759
    Location:97 → 169
    GT1; myb-like, SANT family

  4. XM_031086300.1 → XP_030942160.1  glycine cleavage system H protein 2, mitochondrial-like isoform X1

    Conserved Domains (1) summary
    cl11404
    Location:5 → 95
    Biotinyl_lipoyl_domains; Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases, and the H-protein of the glycine cleavage system (GCS). These domains transport CO2, acyl, ...

  5. XM_031086305.1 → XP_030942165.1  uncharacterized protein LOC115967241 isoform X6

    Conserved Domains (1) summary
    cl11404
    Location:5 → 57
    Biotinyl_lipoyl_domains; Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases, and the H-protein of the glycine cleavage system (GCS). These domains transport CO2, acyl, ...

  6. XM_031086301.1 → XP_030942161.1  glycine cleavage system H protein-like isoform X2

    Conserved Domains (1) summary
    cl11404
    Location:1 → 90
    Biotinyl_lipoyl_domains; Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases, and the H-protein of the glycine cleavage system (GCS). These domains transport CO2, acyl, ...

RNA

  1. XR_004086407.1 RNA Sequence

  2. XR_004086406.1 RNA Sequence

Nucleotide Protein
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