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LOC115958439 glyoxylate/hydroxypyruvate reductase HPR3-like [ Quercus lobata ]

Gene ID: 115958439, updated on 19-Jun-2024

Summary

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Gene symbol
LOC115958439
Gene description
glyoxylate/hydroxypyruvate reductase HPR3-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Quercus lobata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Genomic context

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See LOC115958439 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ValleyOak3.0 (GCF_001633185.1) 8 NC_044911.1 (51300003..51302331, complement)

Chromosome 8 - NC_044911.1Genomic Context describing neighboring genes Neighboring gene polygalacturonate 4-alpha-galacturonosyltransferase Neighboring gene gibberellin 20 oxidase 1-like Neighboring gene glyoxylate/hydroxypyruvate reductase HPR3-like Neighboring gene glyoxylate/hydroxypyruvate reductase HPR3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044911.1 Chromosome 8 Reference ValleyOak3.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glyoxylate reductase (NADPH) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydroxypyruvate reductase [NAD(P)H] activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glyoxylate/hydroxypyruvate reductase HPR3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Quercus lobata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ValleyOak3.0

Genomic

  1. NC_044911.1 Reference ValleyOak3.0

    Range
    51300003..51302331 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031076852.1 → XP_030932712.1  glyoxylate/hydroxypyruvate reductase HPR3-like

    UniProtKB/TrEMBL
    A0A7N2MDT3
    Conserved Domains (1) summary
    cd12156
    Location:23 → 328
    HPPR; Hydroxy(phenyl)pyruvate Reductase, D-isomer-specific 2-hydroxyacid-related dehydrogenase
Nucleotide Protein
Heading Accession and Version

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