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LOC115951897 probable galacturonosyltransferase 7 [ Quercus lobata ]

Gene ID: 115951897, updated on 14-Dec-2023

Summary

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Gene symbol
LOC115951897
Gene description
probable galacturonosyltransferase 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Quercus lobata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Genomic context

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See LOC115951897 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ValleyOak3.0 (GCF_001633185.1) 7 NC_044910.1 (30834246..30839683, complement)

Chromosome 7 - NC_044910.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115952391 Neighboring gene protein SCARECROW-like Neighboring gene E3 ubiquitin-protein ligase RDUF1-like Neighboring gene hsp70 nucleotide exchange factor fes1-like Neighboring gene transfer RNA asparagine (anticodon GUU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044910.1 Chromosome 7 Reference ValleyOak3.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Quercus lobata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ValleyOak3.0

Genomic

  1. NC_044910.1 Reference ValleyOak3.0

    Range
    30834246..30839683 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031069022.1 → XP_030924882.1  probable galacturonosyltransferase 7

    UniProtKB/TrEMBL
    A0A7N2M580
    Conserved Domains (1) summary
    PLN02769
    Location:22 → 677
    PLN02769; Probable galacturonosyltransferase
Nucleotide Protein
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