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LOC115925415 LARGE xylosyl- and glucuronyltransferase 1-like [ Strongylocentrotus purpuratus (purple sea urchin) ]

Gene ID: 115925415, updated on 14-Dec-2023

Summary

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Gene symbol
LOC115925415
Gene description
LARGE xylosyl- and glucuronyltransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Strongylocentrotus purpuratus
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
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Genomic context

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See LOC115925415 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145603.1 (10770433..10796557)

NW_022145603.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4 gamma 2-like Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene HORMA domain-containing protein 1 Neighboring gene ropporin-1-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022145603 Unplaced Scaffold Reference Spur_5.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LARGE xylosyl- and glucuronyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Spur_5.0 Primary Assembly

Genomic

  1. NW_022145603.1 Reference Spur_5.0 Primary Assembly

    Range
    10770433..10796557
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030989185.1 → XP_030845045.1  LARGE xylosyl- and glucuronyltransferase 1-like

    UniProtKB/TrEMBL
    A0A7M7P2H1
    Conserved Domains (2) summary
    cd06431
    Location:131 → 410
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:463 → 732
    Glyco_transf_49; Glycosyl-transferase for dystroglycan
Nucleotide Protein
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