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LOC115918677 xyloside xylosyltransferase 1-like [ Strongylocentrotus purpuratus (purple sea urchin) ]

Gene ID: 115918677, updated on 14-Dec-2023

Summary

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Gene symbol
LOC115918677
Gene description
xyloside xylosyltransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Strongylocentrotus purpuratus
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
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Genomic context

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See LOC115918677 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145601.1 (13002899..13014528, complement)

NW_022145601.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain-containing protein 17 Neighboring gene proteasome subunit beta type-6 Neighboring gene histone H4 Neighboring gene late histone H2A.2.1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022145601 Unplaced Scaffold Reference Spur_5.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis. Tu Q, et al. Genome Res, 2012 Oct. PMID 22709795, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xyloside xylosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Spur_5.0 Primary Assembly

Genomic

  1. NW_022145601.1 Reference Spur_5.0 Primary Assembly

    Range
    13002899..13014528 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030986825.1 → XP_030842685.1  xyloside xylosyltransferase 1-like

    UniProtKB/TrEMBL
    A0A7M7NWC8
    Conserved Domains (1) summary
    cl11394
    Location:134 → 365
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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