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CNOT10 CCR4-NOT transcription complex subunit 10 [ Camarhynchus parvulus ]

Gene ID: 115917696, updated on 3-Aug-2024

Summary

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Gene symbol
CNOT10
Gene description
CCR4-NOT transcription complex subunit 10
See related
Ensembl:ENSCPVG00000005977
Gene type
protein coding
RefSeq status
MODEL
Organism
Camarhynchus parvulus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Camarhynchus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
19
Annotation release Status Assembly Chr Location
100 current STF_HiC (GCF_901933205.1) 2 NC_044572.1 (41865414..41897943)

Chromosome 2 - NC_044572.1Genomic Context describing neighboring genes Neighboring gene dynein cytoplasmic 1 light intermediate chain 1 Neighboring gene uncharacterized LOC115914666 Neighboring gene tripartite motif containing 71 Neighboring gene T cell activation inhibitor, mitochondrial

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044572.1 Chromosome 2 Reference STF_HiC

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CCR4-NOT complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CCR4-NOT transcription complex subunit 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camarhynchus parvulus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference STF_HiC

Genomic

  1. NC_044572.1 Reference STF_HiC

    Range
    41865414..41897943
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030971929.1 → XP_030827789.1  CCR4-NOT transcription complex subunit 10

    UniProtKB/TrEMBL
    A0A8C3MRM8, A0A8C3MTX7
    Related
    ENSCPVP00000008192.1, ENSCPVT00000008503.1
    Conserved Domains (2) summary
    sd00006
    Location:296 → 321
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:296 → 325
    TPR_1; Tetratricopeptide repeat
Nucleotide Protein
Heading Accession and Version

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