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TRIL TLR4 interactor with leucine rich repeats [ Camarhynchus parvulus ]

Gene ID: 115917695, updated on 3-Aug-2024

Summary

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Gene symbol
TRIL
Gene description
TLR4 interactor with leucine rich repeats
Gene type
protein coding
RefSeq status
MODEL
Organism
Camarhynchus parvulus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Camarhynchus
Orthologs
human mouse all
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Genomic context

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See TRIL in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
100 current STF_HiC (GCF_901933205.1) 2 NC_044572.1 (34800266..34804870, complement)

Chromosome 2 - NC_044572.1Genomic Context describing neighboring genes Neighboring gene JAZF zinc finger 1 Neighboring gene cAMP responsive element binding protein 5 Neighboring gene chimerin 2 Neighboring gene proline rich 15

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044572.1 Chromosome 2 Reference STF_HiC

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: TLR4 interactor with leucine rich repeats

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camarhynchus parvulus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference STF_HiC

Genomic

  1. NC_044572.1 Reference STF_HiC

    Range
    34800266..34804870 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030971928.1 → XP_030827788.1  LOW QUALITY PROTEIN: TLR4 interactor with leucine rich repeats

    Conserved Domains (2) summary
    COG4886
    Location:42 → 351
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:91 → 114
    LRR_RI; leucine-rich repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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